mdrun gives error "lost particles" when long bonded interaction and domain decomposition
When using domain decomposition, the Verlet cut-off scheme and bonded interaction which involve distance longer than the non-bonded cut-off distance, the inconsistency error "Lost particles while sorting" can appear.
fix nbnxn atom sorting with distant bondeds
Atoms communicated for bonded interactions can be beyond the non-local
search grid. Only a single cell extra was accounted for, which could
give inconsistency errors. Now any distance is handled correctly.