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Bug #2741

mdrun verbose prints a newline to the terminal for each update

Added by Christian Wennberg 13 days ago. Updated 13 days ago.

Status:
New
Priority:
Low
Assignee:
-
Category:
mdrun
Target version:
Affected version - extra info:
Affected version:
Difficulty:
uncategorized
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Description

When running with "gmx mdrun -v" every update is printed on a new line as long as a time is given.

starting mdrun 'Cubic membrane'
800000 steps, 16000.0 ps.
step 100, will finish Wed Nov 7 14:30:36 2018
step 200, will finish Wed Nov 7 14:30:32 2018
step 300, will finish Wed Nov 7 14:31:08 2018
step 400, will finish Wed Nov 7 14:30:53 2018
(...)

When entering the last minutes of the simulation, when the time is displayed in seconds, each new line instead overwrites the previous one in the terminal, which is the expected behavior.

starting mdrun 'Cubic membrane'
200000 steps, 4000.0 ps.
step 8100, remaining wall clock time: 77 s

History

#1 Updated by Szilárd Páll 13 days ago

  • Target version changed from 2019-beta2 to 2019-beta3

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