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Bug #3050

Fix tests on Solaris

Added by Vedran Miletic about 1 year ago. Updated 7 months ago.

Status:
New
Priority:
Low
Category:
testing
Target version:
Affected version - extra info:
Affected version:
Difficulty:
uncategorized
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Description

Gerrit change 12245 [1] fixes building on Solaris with GCC. Some tests are still failing (details in the comments) and we should address that.

[1] https://gerrit.gromacs.org/c/gromacs/+/12245

Associated revisions

Revision 28acfd11 (diff)
Added by Vedran Miletic 10 months ago

Fix building on Solaris with GCC

GROMACS now compiles on Solaris x86, specifically illumos distribution
openindiana. GCC complained about a missing sqrt() variant which was
addressed with static_cast and linker complained about missing
libsocket which was addressed with SunOS-specific entry in
target_link_libraries.

Refs #3050

Change-Id: Ic14a9327fa353270ef0e787b4d2357e86e71da53

History

#1 Updated by Vedran Miletic about 1 year ago

The following tests FAILED:
          5 - ListedForcesTest (Failed)
         11 - HardwareUnitTests (Failed)
         18 - RandomUnitTests (Failed)
Errors while running CTest
FAILED: CMakeFiles/run-ctest-nophys 
cd /export/home/vedranm/workspace/gromacs/build-5 && /usr/bin/ctest --output-on-failure -E physicalvalidationtests

More details soon.

#2 Updated by Vedran Miletic about 1 year ago

GCC 5:

[0/1] Running tests...
Test project /export/home/vedranm/workspace/gromacs/build-5
      Start  1: TestUtilsUnitTests
 1/44 Test  #1: TestUtilsUnitTests ...............   Passed    0.34 sec
      Start  2: TestUtilsMpiUnitTests
 2/44 Test  #2: TestUtilsMpiUnitTests ............   Passed    0.14 sec
      Start  3: MdlibUnitTest
 3/44 Test  #3: MdlibUnitTest ....................   Passed    0.37 sec
      Start  4: AppliedForcesUnitTest
 4/44 Test  #4: AppliedForcesUnitTest ............   Passed    0.18 sec
      Start  5: ListedForcesTest
 5/44 Test  #5: ListedForcesTest .................***Failed    0.37 sec
      Start  6: CommandLineUnitTests
 6/44 Test  #6: CommandLineUnitTests .............   Passed    0.22 sec
      Start  7: DomDecTests
 7/44 Test  #7: DomDecTests ......................   Passed    0.10 sec
      Start  8: EwaldUnitTests
 8/44 Test  #8: EwaldUnitTests ...................   Passed    0.74 sec
      Start  9: FFTUnitTests
 9/44 Test  #9: FFTUnitTests .....................   Passed    0.22 sec
      Start 10: GpuUtilsUnitTests
10/44 Test #10: GpuUtilsUnitTests ................   Passed    0.13 sec
      Start 11: HardwareUnitTests
11/44 Test #11: HardwareUnitTests ................***Failed    0.14 sec
      Start 12: MathUnitTests
12/44 Test #12: MathUnitTests ....................   Passed    0.22 sec
      Start 13: MdrunUtilityUnitTests
13/44 Test #13: MdrunUtilityUnitTests ............   Passed    0.19 sec
      Start 14: MdrunUtilityMpiUnitTests
14/44 Test #14: MdrunUtilityMpiUnitTests .........   Passed   17.68 sec
      Start 15: MDSpanTests
15/44 Test #15: MDSpanTests ......................   Passed    0.15 sec
      Start 16: OnlineHelpUnitTests
16/44 Test #16: OnlineHelpUnitTests ..............   Passed    0.14 sec
      Start 17: OptionsUnitTests
17/44 Test #17: OptionsUnitTests .................   Passed    0.18 sec
      Start 18: RandomUnitTests
18/44 Test #18: RandomUnitTests ..................***Failed    0.15 sec
      Start 19: RestraintTests
19/44 Test #19: RestraintTests ...................   Passed    0.10 sec
      Start 20: TableUnitTests
20/44 Test #20: TableUnitTests ...................   Passed    0.43 sec
      Start 21: TaskAssignmentUnitTests
21/44 Test #21: TaskAssignmentUnitTests ..........   Passed    0.10 sec
      Start 22: TopologyTest
22/44 Test #22: TopologyTest .....................   Passed    0.14 sec
      Start 23: UtilityUnitTests
23/44 Test #23: UtilityUnitTests .................   Passed    0.25 sec
      Start 24: UtilityMpiUnitTests
24/44 Test #24: UtilityMpiUnitTests ..............   Passed    0.17 sec
      Start 25: FileIOTests
25/44 Test #25: FileIOTests ......................   Passed    0.24 sec
      Start 26: PullTest
26/44 Test #26: PullTest .........................   Passed    0.12 sec
      Start 27: AwhTest
27/44 Test #27: AwhTest ..........................   Passed    0.14 sec
      Start 28: SimdUnitTests
28/44 Test #28: SimdUnitTests ....................   Passed    0.12 sec
      Start 29: CompatibilityHelpersTests
29/44 Test #29: CompatibilityHelpersTests ........   Passed    0.22 sec
      Start 30: GmxAnaTest
30/44 Test #30: GmxAnaTest .......................   Passed    5.35 sec
      Start 31: GmxPreprocessTests
31/44 Test #31: GmxPreprocessTests ...............   Passed    1.41 sec
      Start 32: Pdb2gmx1Test
32/44 Test #32: Pdb2gmx1Test .....................   Passed    7.18 sec
      Start 33: Pdb2gmx2Test
33/44 Test #33: Pdb2gmx2Test .....................   Passed    4.27 sec
      Start 34: Pdb2gmx3Test
34/44 Test #34: Pdb2gmx3Test .....................   Passed    6.23 sec
      Start 35: CorrelationsTest
35/44 Test #35: CorrelationsTest .................   Passed    0.54 sec
      Start 36: AnalysisDataUnitTests
36/44 Test #36: AnalysisDataUnitTests ............   Passed    0.54 sec
      Start 37: CoordinateIOTests
37/44 Test #37: CoordinateIOTests ................   Passed    0.65 sec
      Start 38: SelectionUnitTests
38/44 Test #38: SelectionUnitTests ...............   Passed    0.81 sec
      Start 39: TrajectoryAnalysisUnitTests
39/44 Test #39: TrajectoryAnalysisUnitTests ......   Passed    3.95 sec
      Start 40: EnergyAnalysisUnitTests
40/44 Test #40: EnergyAnalysisUnitTests ..........   Passed    0.35 sec
      Start 41: ToolUnitTests
41/44 Test #41: ToolUnitTests ....................   Passed    6.01 sec
      Start 42: MdrunTests
42/44 Test #42: MdrunTests .......................   Passed    9.99 sec
      Start 43: MdrunNonIntegratorTests
43/44 Test #43: MdrunNonIntegratorTests ..........   Passed   17.34 sec
      Start 44: MdrunMpiTests
44/44 Test #44: MdrunMpiTests ....................   Passed    7.40 sec

93% tests passed, 3 tests failed out of 44

Label Time Summary:
GTest              =  95.73 sec*proc (44 tests)
IntegrationTest    =  40.08 sec*proc (4 tests)
MpiTest            =  18.00 sec*proc (3 tests)
UnitTest           =  55.65 sec*proc (40 tests)

Total Test time (real) =  96.21 sec

The following tests FAILED:
      5 - ListedForcesTest (Failed)
     11 - HardwareUnitTests (Failed)
     18 - RandomUnitTests (Failed)
FAILED: CMakeFiles/test.util 
cd /export/home/vedranm/workspace/gromacs/build-5 && /usr/bin/ctest --force-new-ctest-process
ninja: build stopped: subcommand failed.

GCC 6:

[0/1] Running tests...
Test project /export/home/vedranm/workspace/gromacs/build-6
      Start  1: TestUtilsUnitTests
 1/44 Test  #1: TestUtilsUnitTests ...............   Passed    0.37 sec
      Start  2: TestUtilsMpiUnitTests
 2/44 Test  #2: TestUtilsMpiUnitTests ............   Passed    0.13 sec
      Start  3: MdlibUnitTest
 3/44 Test  #3: MdlibUnitTest ....................   Passed    0.46 sec
      Start  4: AppliedForcesUnitTest
 4/44 Test  #4: AppliedForcesUnitTest ............   Passed    0.14 sec
      Start  5: ListedForcesTest
 5/44 Test  #5: ListedForcesTest .................***Failed    0.34 sec
      Start  6: CommandLineUnitTests
 6/44 Test  #6: CommandLineUnitTests .............   Passed    0.21 sec
      Start  7: DomDecTests
 7/44 Test  #7: DomDecTests ......................   Passed    0.10 sec
      Start  8: EwaldUnitTests
 8/44 Test  #8: EwaldUnitTests ...................   Passed    1.24 sec
      Start  9: FFTUnitTests
 9/44 Test  #9: FFTUnitTests .....................   Passed    0.19 sec
      Start 10: GpuUtilsUnitTests
10/44 Test #10: GpuUtilsUnitTests ................   Passed    0.15 sec
      Start 11: HardwareUnitTests
11/44 Test #11: HardwareUnitTests ................***Failed    0.12 sec
      Start 12: MathUnitTests
12/44 Test #12: MathUnitTests ....................   Passed    0.20 sec
      Start 13: MdrunUtilityUnitTests
13/44 Test #13: MdrunUtilityUnitTests ............   Passed    0.15 sec
      Start 14: MdrunUtilityMpiUnitTests
14/44 Test #14: MdrunUtilityMpiUnitTests .........   Passed   16.02 sec
      Start 15: MDSpanTests
15/44 Test #15: MDSpanTests ......................   Passed    0.14 sec
      Start 16: OnlineHelpUnitTests
16/44 Test #16: OnlineHelpUnitTests ..............   Passed    0.14 sec
      Start 17: OptionsUnitTests
17/44 Test #17: OptionsUnitTests .................   Passed    0.18 sec
      Start 18: RandomUnitTests
18/44 Test #18: RandomUnitTests ..................***Failed    0.18 sec
      Start 19: RestraintTests
19/44 Test #19: RestraintTests ...................   Passed    0.11 sec
      Start 20: TableUnitTests
20/44 Test #20: TableUnitTests ...................   Passed    0.47 sec
      Start 21: TaskAssignmentUnitTests
21/44 Test #21: TaskAssignmentUnitTests ..........   Passed    0.11 sec
      Start 22: TopologyTest
22/44 Test #22: TopologyTest .....................   Passed    0.15 sec
      Start 23: UtilityUnitTests
23/44 Test #23: UtilityUnitTests .................   Passed    0.32 sec
      Start 24: UtilityMpiUnitTests
24/44 Test #24: UtilityMpiUnitTests ..............   Passed    0.17 sec
      Start 25: FileIOTests
25/44 Test #25: FileIOTests ......................   Passed    0.41 sec
      Start 26: PullTest
26/44 Test #26: PullTest .........................   Passed    0.12 sec
      Start 27: AwhTest
27/44 Test #27: AwhTest ..........................   Passed    0.17 sec
      Start 28: SimdUnitTests
28/44 Test #28: SimdUnitTests ....................   Passed    0.12 sec
      Start 29: CompatibilityHelpersTests
29/44 Test #29: CompatibilityHelpersTests ........   Passed    0.16 sec
      Start 30: GmxAnaTest
30/44 Test #30: GmxAnaTest .......................   Passed    5.45 sec
      Start 31: GmxPreprocessTests
31/44 Test #31: GmxPreprocessTests ...............   Passed    1.30 sec
      Start 32: Pdb2gmx1Test
32/44 Test #32: Pdb2gmx1Test .....................   Passed    5.83 sec
      Start 33: Pdb2gmx2Test
33/44 Test #33: Pdb2gmx2Test .....................   Passed    4.93 sec
      Start 34: Pdb2gmx3Test
34/44 Test #34: Pdb2gmx3Test .....................   Passed    5.59 sec
      Start 35: CorrelationsTest
35/44 Test #35: CorrelationsTest .................   Passed    0.45 sec
      Start 36: AnalysisDataUnitTests
36/44 Test #36: AnalysisDataUnitTests ............   Passed    0.25 sec
      Start 37: CoordinateIOTests
37/44 Test #37: CoordinateIOTests ................   Passed    0.86 sec
      Start 38: SelectionUnitTests
38/44 Test #38: SelectionUnitTests ...............   Passed    0.83 sec
      Start 39: TrajectoryAnalysisUnitTests
39/44 Test #39: TrajectoryAnalysisUnitTests ......   Passed    3.76 sec
      Start 40: EnergyAnalysisUnitTests
40/44 Test #40: EnergyAnalysisUnitTests ..........   Passed    0.37 sec
      Start 41: ToolUnitTests
41/44 Test #41: ToolUnitTests ....................   Passed    5.95 sec
      Start 42: MdrunTests
42/44 Test #42: MdrunTests .......................   Passed    9.59 sec
      Start 43: MdrunNonIntegratorTests
43/44 Test #43: MdrunNonIntegratorTests ..........   Passed   19.06 sec
      Start 44: MdrunMpiTests
44/44 Test #44: MdrunMpiTests ....................   Passed    7.18 sec

93% tests passed, 3 tests failed out of 44

Label Time Summary:
GTest              =  94.20 sec*proc (44 tests)
IntegrationTest    =  41.28 sec*proc (4 tests)
MpiTest            =  16.32 sec*proc (3 tests)
UnitTest           =  52.91 sec*proc (40 tests)

Total Test time (real) =  94.59 sec

The following tests FAILED:
      5 - ListedForcesTest (Failed)
     11 - HardwareUnitTests (Failed)
     18 - RandomUnitTests (Failed)
FAILED: CMakeFiles/test.util 
cd /export/home/vedranm/workspace/gromacs/build-6 && /usr/bin/ctest --force-new-ctest-process
ninja: build stopped: subcommand failed.

GCC 7:

[0/1] Running tests...
Test project /export/home/vedranm/workspace/gromacs/build-7
      Start  1: TestUtilsUnitTests
 1/44 Test  #1: TestUtilsUnitTests ...............   Passed    0.37 sec
      Start  2: TestUtilsMpiUnitTests
 2/44 Test  #2: TestUtilsMpiUnitTests ............   Passed    0.14 sec
      Start  3: MdlibUnitTest
 3/44 Test  #3: MdlibUnitTest ....................   Passed    0.37 sec
      Start  4: AppliedForcesUnitTest
 4/44 Test  #4: AppliedForcesUnitTest ............   Passed    0.14 sec
      Start  5: ListedForcesTest
 5/44 Test  #5: ListedForcesTest .................***Failed    0.56 sec
      Start  6: CommandLineUnitTests
 6/44 Test  #6: CommandLineUnitTests .............   Passed    0.45 sec
      Start  7: DomDecTests
 7/44 Test  #7: DomDecTests ......................   Passed    0.15 sec
      Start  8: EwaldUnitTests
 8/44 Test  #8: EwaldUnitTests ...................   Passed    0.97 sec
      Start  9: FFTUnitTests
 9/44 Test  #9: FFTUnitTests .....................   Passed    0.21 sec
      Start 10: GpuUtilsUnitTests
10/44 Test #10: GpuUtilsUnitTests ................   Passed    0.17 sec
      Start 11: HardwareUnitTests
11/44 Test #11: HardwareUnitTests ................***Failed    0.12 sec
      Start 12: MathUnitTests
12/44 Test #12: MathUnitTests ....................   Passed    0.24 sec
      Start 13: MdrunUtilityUnitTests
13/44 Test #13: MdrunUtilityUnitTests ............   Passed    0.54 sec
      Start 14: MdrunUtilityMpiUnitTests
14/44 Test #14: MdrunUtilityMpiUnitTests .........   Passed   15.90 sec
      Start 15: MDSpanTests
15/44 Test #15: MDSpanTests ......................   Passed    0.16 sec
      Start 16: OnlineHelpUnitTests
16/44 Test #16: OnlineHelpUnitTests ..............   Passed    0.18 sec
      Start 17: OptionsUnitTests
17/44 Test #17: OptionsUnitTests .................   Passed    0.25 sec
      Start 18: RandomUnitTests
18/44 Test #18: RandomUnitTests ..................***Failed    0.26 sec
      Start 19: RestraintTests
19/44 Test #19: RestraintTests ...................   Passed    0.15 sec
      Start 20: TableUnitTests
20/44 Test #20: TableUnitTests ...................   Passed    0.41 sec
      Start 21: TaskAssignmentUnitTests
21/44 Test #21: TaskAssignmentUnitTests ..........   Passed    0.14 sec
      Start 22: TopologyTest
22/44 Test #22: TopologyTest .....................   Passed    0.11 sec
      Start 23: UtilityUnitTests
23/44 Test #23: UtilityUnitTests .................   Passed    0.40 sec
      Start 24: UtilityMpiUnitTests
24/44 Test #24: UtilityMpiUnitTests ..............   Passed    0.22 sec
      Start 25: FileIOTests
25/44 Test #25: FileIOTests ......................   Passed    0.20 sec
      Start 26: PullTest
26/44 Test #26: PullTest .........................   Passed    0.13 sec
      Start 27: AwhTest
27/44 Test #27: AwhTest ..........................   Passed    0.13 sec
      Start 28: SimdUnitTests
28/44 Test #28: SimdUnitTests ....................   Passed    0.11 sec
      Start 29: CompatibilityHelpersTests
29/44 Test #29: CompatibilityHelpersTests ........   Passed    0.11 sec
      Start 30: GmxAnaTest
30/44 Test #30: GmxAnaTest .......................   Passed    3.84 sec
      Start 31: GmxPreprocessTests
31/44 Test #31: GmxPreprocessTests ...............   Passed    1.41 sec
      Start 32: Pdb2gmx1Test
32/44 Test #32: Pdb2gmx1Test .....................   Passed    6.00 sec
      Start 33: Pdb2gmx2Test
33/44 Test #33: Pdb2gmx2Test .....................   Passed    5.00 sec
      Start 34: Pdb2gmx3Test
34/44 Test #34: Pdb2gmx3Test .....................   Passed    4.81 sec
      Start 35: CorrelationsTest
35/44 Test #35: CorrelationsTest .................   Passed    0.48 sec
      Start 36: AnalysisDataUnitTests
36/44 Test #36: AnalysisDataUnitTests ............   Passed    0.16 sec
      Start 37: CoordinateIOTests
37/44 Test #37: CoordinateIOTests ................   Passed    0.51 sec
      Start 38: SelectionUnitTests
38/44 Test #38: SelectionUnitTests ...............   Passed    0.98 sec
      Start 39: TrajectoryAnalysisUnitTests
39/44 Test #39: TrajectoryAnalysisUnitTests ......   Passed    3.52 sec
      Start 40: EnergyAnalysisUnitTests
40/44 Test #40: EnergyAnalysisUnitTests ..........   Passed    0.25 sec
      Start 41: ToolUnitTests
41/44 Test #41: ToolUnitTests ....................   Passed    5.59 sec
      Start 42: MdrunTests
42/44 Test #42: MdrunTests .......................   Passed    9.27 sec
      Start 43: MdrunNonIntegratorTests
43/44 Test #43: MdrunNonIntegratorTests ..........   Passed   17.68 sec
      Start 44: MdrunMpiTests
44/44 Test #44: MdrunMpiTests ....................   Passed    6.58 sec

93% tests passed, 3 tests failed out of 44

Label Time Summary:
GTest              =  89.34 sec*proc (44 tests)
IntegrationTest    =  37.38 sec*proc (4 tests)
MpiTest            =  16.25 sec*proc (3 tests)
UnitTest           =  51.96 sec*proc (40 tests)

Total Test time (real) =  89.83 sec

The following tests FAILED:
      5 - ListedForcesTest (Failed)
     11 - HardwareUnitTests (Failed)
     18 - RandomUnitTests (Failed)
FAILED: CMakeFiles/test.util 
cd /export/home/vedranm/workspace/gromacs/build-7 && /usr/bin/ctest --force-new-ctest-process
ninja: build stopped: subcommand failed.

GCC 8:

[0/1] Running tests...
Test project /export/home/vedranm/workspace/gromacs/build-8
      Start  1: TestUtilsUnitTests
 1/44 Test  #1: TestUtilsUnitTests ...............   Passed    0.43 sec
      Start  2: TestUtilsMpiUnitTests
 2/44 Test  #2: TestUtilsMpiUnitTests ............   Passed    0.14 sec
      Start  3: MdlibUnitTest
 3/44 Test  #3: MdlibUnitTest ....................   Passed    0.35 sec
      Start  4: AppliedForcesUnitTest
 4/44 Test  #4: AppliedForcesUnitTest ............   Passed    0.11 sec
      Start  5: ListedForcesTest
 5/44 Test  #5: ListedForcesTest .................***Failed    0.47 sec
      Start  6: CommandLineUnitTests
 6/44 Test  #6: CommandLineUnitTests .............   Passed    0.05 sec
      Start  7: DomDecTests
 7/44 Test  #7: DomDecTests ......................   Passed    0.10 sec
      Start  8: EwaldUnitTests
 8/44 Test  #8: EwaldUnitTests ...................   Passed    0.59 sec
      Start  9: FFTUnitTests
 9/44 Test  #9: FFTUnitTests .....................   Passed    0.09 sec
      Start 10: GpuUtilsUnitTests
10/44 Test #10: GpuUtilsUnitTests ................   Passed    0.03 sec
      Start 11: HardwareUnitTests
11/44 Test #11: HardwareUnitTests ................***Failed    0.05 sec
      Start 12: MathUnitTests
12/44 Test #12: MathUnitTests ....................   Passed    0.05 sec
      Start 13: MdrunUtilityUnitTests
13/44 Test #13: MdrunUtilityUnitTests ............   Passed    0.03 sec
      Start 14: MdrunUtilityMpiUnitTests
14/44 Test #14: MdrunUtilityMpiUnitTests .........   Passed   20.20 sec
      Start 15: MDSpanTests
15/44 Test #15: MDSpanTests ......................   Passed    0.06 sec
      Start 16: OnlineHelpUnitTests
16/44 Test #16: OnlineHelpUnitTests ..............   Passed    0.08 sec
      Start 17: OptionsUnitTests
17/44 Test #17: OptionsUnitTests .................   Passed    0.11 sec
      Start 18: RandomUnitTests
18/44 Test #18: RandomUnitTests ..................   Passed    0.12 sec
      Start 19: RestraintTests
19/44 Test #19: RestraintTests ...................   Passed    0.05 sec
      Start 20: TableUnitTests
20/44 Test #20: TableUnitTests ...................   Passed    0.39 sec
      Start 21: TaskAssignmentUnitTests
21/44 Test #21: TaskAssignmentUnitTests ..........   Passed    0.06 sec
      Start 22: TopologyTest
22/44 Test #22: TopologyTest .....................   Passed    0.06 sec
      Start 23: UtilityUnitTests
23/44 Test #23: UtilityUnitTests .................   Passed    0.19 sec
      Start 24: UtilityMpiUnitTests
24/44 Test #24: UtilityMpiUnitTests ..............   Passed    0.12 sec
      Start 25: FileIOTests
25/44 Test #25: FileIOTests ......................   Passed    0.06 sec
      Start 26: PullTest
26/44 Test #26: PullTest .........................   Passed    0.11 sec
      Start 27: AwhTest
27/44 Test #27: AwhTest ..........................   Passed    0.04 sec
      Start 28: SimdUnitTests
28/44 Test #28: SimdUnitTests ....................   Passed    0.03 sec
      Start 29: CompatibilityHelpersTests
29/44 Test #29: CompatibilityHelpersTests ........   Passed    0.04 sec
      Start 30: GmxAnaTest
30/44 Test #30: GmxAnaTest .......................   Passed    4.28 sec
      Start 31: GmxPreprocessTests
31/44 Test #31: GmxPreprocessTests ...............   Passed    1.41 sec
      Start 32: Pdb2gmx1Test
32/44 Test #32: Pdb2gmx1Test .....................   Passed    6.10 sec
      Start 33: Pdb2gmx2Test
33/44 Test #33: Pdb2gmx2Test .....................   Passed    4.45 sec
      Start 34: Pdb2gmx3Test
34/44 Test #34: Pdb2gmx3Test .....................   Passed    5.49 sec
      Start 35: CorrelationsTest
35/44 Test #35: CorrelationsTest .................   Passed    0.64 sec
      Start 36: AnalysisDataUnitTests
36/44 Test #36: AnalysisDataUnitTests ............   Passed    0.26 sec
      Start 37: CoordinateIOTests
37/44 Test #37: CoordinateIOTests ................   Passed    0.57 sec
      Start 38: SelectionUnitTests
38/44 Test #38: SelectionUnitTests ...............   Passed    0.63 sec
      Start 39: TrajectoryAnalysisUnitTests
39/44 Test #39: TrajectoryAnalysisUnitTests ......   Passed    4.16 sec
      Start 40: EnergyAnalysisUnitTests
40/44 Test #40: EnergyAnalysisUnitTests ..........   Passed    0.40 sec
      Start 41: ToolUnitTests
41/44 Test #41: ToolUnitTests ....................   Passed    6.10 sec
      Start 42: MdrunTests
42/44 Test #42: MdrunTests .......................   Passed    9.19 sec
      Start 43: MdrunNonIntegratorTests
43/44 Test #43: MdrunNonIntegratorTests ..........   Passed   17.71 sec
      Start 44: MdrunMpiTests
44/44 Test #44: MdrunMpiTests ....................   Passed    6.93 sec

95% tests passed, 2 tests failed out of 44

Label Time Summary:
GTest              =  92.53 sec*proc (44 tests)
IntegrationTest    =  38.11 sec*proc (4 tests)
MpiTest            =  20.46 sec*proc (3 tests)
UnitTest           =  54.42 sec*proc (40 tests)

Total Test time (real) =  93.04 sec

The following tests FAILED:
      5 - ListedForcesTest (Failed)
     11 - HardwareUnitTests (Failed)
FAILED: CMakeFiles/test.util 
cd /export/home/vedranm/workspace/gromacs/build-8 && /usr/bin/ctest --force-new-ctest-process
ninja: build stopped: subcommand failed.

#3 Updated by Vedran Miletic 10 months ago

(After applying https://gerrit.gromacs.org/c/gromacs/+/14386)

Current release-2020 branch:

75% tests passed, 12 tests failed out of 48                                                                                                                                                                                                                              

Label Time Summary:                                                                                                                                                                                                                                                      
GTest              = 531.47 sec*proc (48 tests)                                                                                                                                                                                                                          
IntegrationTest    = 109.04 sec*proc (5 tests)                                                                                                                                                                                                                           
MpiTest            = 300.84 sec*proc (6 tests)                                                                                                                                                                                                                           
SlowTest           = 293.82 sec*proc (2 tests)                                                                                      
UnitTest           = 128.60 sec*proc (41 tests)                                                                                     

Total Test time (real) = 536.12 sec

The following tests FAILED:                                                                            
          1 - TestUtilsUnitTests (SEGFAULT)                                                            
          7 - ListedForcesTest (Failed)                                                                                                                                                                       
          8 - CommandLineUnitTests (Child aborted)                                                     
         14 - MathUnitTests (Failed)                                                                   
         15 - MdrunUtilityUnitTests (Child aborted)                                                    
         16 - MdrunUtilityMpiUnitTests (SEGFAULT)                                                      
         18 - OnlineHelpUnitTests (SEGFAULT)                                                           
         19 - OptionsUnitTests (SEGFAULT)                                                                                                                                                                     
         36 - AnalysisDataUnitTests (Child aborted)                                                    
         38 - TrajectoryAnalysisUnitTests (SEGFAULT)                                                   
         40 - ToolUnitTests (Timeout)                                                                  
         42 - SelectionUnitTests (SEGFAULT) 

Current release-2019 branch:

100% tests passed, 0 tests failed out of 40

Label Time Summary:
GTest              =  87.93 sec*proc (40 tests)
IntegrationTest    =  26.91 sec*proc (5 tests)
MpiTest            =   3.41 sec*proc (3 tests)
SlowTest           =  44.87 sec*proc (1 test)
UnitTest           =  16.15 sec*proc (34 tests)

Total Test time (real) =  88.22 sec

Wonder what broke it, I'll bisect.

#4 Updated by Erik Lindahl 9 months ago

If you post the detailed output from the specific tests that fail (e.g. by explicitly running that test), I might be able to debug from that output.

#5 Updated by Paul Bauer 9 months ago

  • Target version changed from 2020 to 2020.1

We should try to fix the underlying issues for 2020.1

#6 Updated by Paul Bauer 7 months ago

  • Target version changed from 2020.1 to 2020.2

any updates?
bumping otherwise

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