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Bug #3116

regressiontests/freeenergy core dumps on ppc64le

Added by Christoph Junghans about 2 months ago. Updated about 2 months ago.

Status:
New
Priority:
Normal
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Category:
-
Target version:
-
Affected version - extra info:
Affected version:
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Description

44/46 Test #44: regressiontests/freeenergy ..........***Failed    7.53 sec
                      :-) GROMACS - gmx mdrun, 2019.4 (-:
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  Gerrit Groenhof     Anca Hamuraru    Vincent Hindriksen  M. Eric Irrgang  
  Aleksei Iupinov   Christoph Junghans     Joe Jordan     Dimitrios Karkoulis
    Peter Kasson        Jiri Kraus      Carsten Kutzner      Per Larsson    
  Justin A. Lemkul    Viveca Lindahl    Magnus Lundborg     Erik Marklund   
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GROMACS:      gmx mdrun, version 2019.4
Executable:   /builddir/build/BUILD/gromacs-2019.4/serial/bin/gmx
Data prefix:  /builddir/build/BUILD/gromacs-2019.4 (source tree)
Working dir:  /builddir/build/BUILD/gromacs-2019.4/serial/tests
Command line:
  gmx mdrun -h
Thanx for Using GROMACS - Have a Nice Day
sh: line 1:  6566 Aborted                 (core dumped) gmx mdrun -nb cpu -notunepme > mdrun.out 2>&1
Abnormal return value for ' gmx mdrun    -nb cpu   -notunepme >mdrun.out 2>&1' was -1
FAILED. Check mdrun.out, md.log file(s) in coulandvdwsequential_coul for coulandvdwsequential_coul
1 out of 10 freeenergy tests FAILED

See here: https://koji.fedoraproject.org/koji/taskinfo?taskID=38010874

build_ppc64.log.txt (6.72 MB) build_ppc64.log.txt build log on ppc64le Christoph Junghans, 10/03/2019 03:54 AM

Related issues

Related to GROMACS - Bug #2734: regressiontests/kernel core dumps on ppc64leIn Progress

History

#1 Updated by Christoph Junghans about 2 months ago

  • Related to Bug #2734: regressiontests/kernel core dumps on ppc64le added

#2 Updated by Christoph Junghans about 2 months ago

It seems this is only on Fedora 30 and lower, Fedora 31 and 32 seem to be fine, so time will solve this issue.

#3 Updated by Szilárd Páll about 2 months ago

Christoph Junghans wrote:

It seems this is only on Fedora 30 and lower, Fedora 31 and 32 seem to be fine, so time will solve this issue.

IBM has done some work to fix Power8 fusion-related codegen bugs in gcc. These fixes were released in 9.2. We did however disable fusion in cmake, so not sure whether what you observe is related.

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