enable command-line option checking in tools
Command line option checking has been recently enabled in mdrun, but there are a few tools in which this still needs to be fixed: g_tune_pme, g_pme_error, g_membed. The rewriting/fixing of these tools for 4.6 is ongoing and should include this task before the submission of the new code.
enable command line option cheking in mdrun
Command line option checking has been disabled in mdrun. This can cause
unexpected issues e.g. when mdrun disregards an option with a typo.
Note that a few tools (g_tune_pme, g_pme_error, and g_membed) also omit
option checking, but these either rely on this "feature" or are in process
of rewriting/fixing for 4.6 which will implement the checkin. refs #922