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Bug #982

segfault in genion

Added by Christoph Junghans almost 7 years ago. Updated almost 7 years ago.

Status:
Closed
Priority:
High
Assignee:
Category:
-
Target version:
Affected version - extra info:
Affected version:
Difficulty:
uncategorized
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Description

gdb --args genion -s ions.tpr -o 1AKI_solv_ions.gro -p topol.top -pname NA -nname CL -nn 8

(gdb) run
Program received signal SIGSEGV, Segmentation fault.
0xb7818322 in init_par (argc=0x0, argv_ptr=0x0) at /home/christoph/votca/src/gromacs/src/gmxlib/main.c:490
490 argv = *argv_ptr;
(gdb) bt
#0 0xb7818322 in init_par (argc=0x0, argv_ptr=0x0) at /home/christoph/votca/src/gromacs/src/gmxlib/main.c:490
#1 0xb7f3a683 in init_calcpot (log=0x804d0d0 "genion.log", tpx=0x804d2f8 "ions.tpr",
table=0x804d070 "table.xvg", mtop=0x804d100, top=0x804d338, inputrec=0xbfffe558, cr=0xbfffe554,
graph=0xbfffe350, mdatoms=0xbfffe550, fr=0xbfffe34c, enerd=0xbfffe354, pot=0xbfffe344, box=0xbfffe320,
x=0xbfffe348, oenv=0x804d298) at /home/christoph/votca/src/gromacs/src/tools/calcpot.c:232
#2 0xb7f2d537 in gmx_genion (argc=1, argv=0xbfffea04)
at /home/christoph/votca/src/gromacs/src/tools/gmx_genion.c:420
#3 0x0804872f in main (argc=13, argv=0xbfffea04) at /home/christoph/votca/src/gromacs/src/tools/genion.c:49

History

#1 Updated by Christoph Junghans almost 7 years ago

  • Status changed from New to Closed

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