4.6.6

Bug #1022: pdb2gmx n-terminus

Bug #1189: g_mindist and PBC

Bug #1245: Bug in REMD with particle decomposition

Bug #1296: gromacs 4.6.2 regressiontests hang on darwin10/11/12

Bug #1374: add warning that separate PME ranks are never used with GPUs

Bug #1381: generic group non-bonded kernel incorrect PME-switch and RF

Bug #1395: rtp errors gromos and opls

Bug #1400: Can't reproduce results on DPPC with reaction field under version 4.5.3 compared to 4.0.7

Bug #1408: Incorrect dvdlambda : posres() in gmxlib/bondfree.c (4.6.* & 4.5.2+)

Bug #1412: GMX_BUILD_OWN_FFTW -- breaks without Fortran compiler?

Bug #1428: rdtscp and illegal instructions

Bug #1429: shell code issues (broken with DD+grid; broken with Verlet scheme)

Bug #1445: g_sas computes incorrect values with -nopbc

Bug #1462: Constraining v or f in parallel can give incorrect results

Bug #1463: Potential modifier potential-switch gives incorrect forces for perturbed pairs

Bug #1467: 8-way parallel run of small system does not match forces of single-thread run after first step

Bug #1488: pdb2gmx confused by insertion codes

Bug #1497: continuation runs issue confusing error if output file is not found

Bug #1527: mass contribution to dH/dlambda has wrong sign

Bug #1544: Most test fails after success compilation when GMX_THREAD_MPI=ON

Feature #1446: suboptimal error message from grompp when a required group is not defined in the mdp file

GROMACS