Covariance analysis log, written Thu Oct 4 09:04:53 2018
Program: covar
Working directory: /erco-storage/magnusl/skin_simulations/ferring/formulation_a/without_carbopol/preinsertion_fe/formulation
Read 91 frames from ../../equil/equil.xtc (time 1000 to 10000 ps)
Read reference structure for fit from topol_no_restr_0.tpr
Analysis group is 'LIG' (49 atoms)
Fit group is 'LIG' (49 atoms)
Analysis is non-mass weighted
Fit is non-mass weighted
Diagonalized the 147x147 covariance matrix
Trace of the covariance matrix before diagonalizing: 0.090963
Trace of the covariance matrix after diagonalizing: 0.090963
Wrote 90 eigenvalues to eigenval.xvg
Wrote reference structure to eigenvec.trr
Wrote average structure to average.pdb and eigenvec.trr
Wrote eigenvectors 1 to 90 to eigenvec.trr