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Updated
Target version
3442
GROMACS
Bug
Accepted
Normal
continuing mdrun with -deffnm and pulling does not work
03/15/2020 08:33 AM
3441
GROMACS
Bug
Resolved
Normal
Ewald surface-epsilon is incorrect
Berk Hess
03/18/2020 11:15 PM
GROMACS - 2020.2
3407
GROMACS
Bug
Closed
Normal
Slight underestimate of the pairlist buffer on Intel GPUs
Berk Hess
03/03/2020 10:41 AM
GROMACS - 2020.1
3406
GROMACS
Bug
Closed
Normal
#DOF for temperature coupling incorrect when some atoms are not part of a COM removal group
Berk Hess
03/03/2020 10:41 AM
GROMACS - 2020.1
3390
GROMACS
Bug
Closed
Normal
mdrun allows multidir runs that share the state to start/continue with different initial steps
Berk Hess
02/24/2020 03:35 PM
GROMACS - 2020.1
3382
GROMACS
Task
Accepted
Normal
Split up t_inputrec
02/17/2020 05:28 PM
3355
GROMACS
Feature
Accepted
Normal
New PME parallel (GPU) scheme
Jonathan Vincent
02/12/2020 11:58 AM
3303
GROMACS
Bug
Closed
Normal
mdrun exits with an assertion failure when running with shells and GPU update
Berk Hess
01/21/2020 09:43 AM
GROMACS - 2020.1
3244
GROMACS
Bug
In Progress
Normal
center of mass motion removal with position restraints can lead to artifacts
Berk Hess
12/27/2019 10:40 AM
GROMACS - 2021
3230
GROMACS
Bug
Closed
Normal
mdrun-test -ntmpi 2 deadlock in calculateForces in density fitting
Christian Blau
12/20/2019 08:17 AM
GROMACS - 2020-rc1
3229
GROMACS
Task
New
Normal
Move checkpointing to the beginning of the MD step
01/16/2020 04:31 PM
GROMACS - 2021-infrastructure-stable
3201
GROMACS
Task
In Progress
Normal
Convert mdp parameters to key value tree
11/06/2019 06:06 PM
3173
GROMACS
Bug
Closed
Normal
Illegal memory access in free-energy calculations
Berk Hess
11/20/2019 05:15 PM
GROMACS - 2019.5
3155
GROMACS
Task
Accepted
Normal
Unify DD and CPU-GPU gather & scatter
Artem Zhmurov
10/17/2019 03:50 PM
GROMACS - 2021-infrastructure-stable
3151
GROMACS
Bug
Closed
Normal
integrator md-vv does not print at nstlog
Pascal Merz
10/23/2019 09:16 AM
GROMACS - 2020-beta2
3127
GROMACS
Bug
New
Normal
mdrun-mpi-test -ntmpi 2 runs out of memory with OpenCL on Nvidia
10/09/2019 05:33 PM
3120
GROMACS
Bug
Closed
High
Uninitialized energy and virial contributions with PME on GPU on PME-only rank
11/20/2019 05:15 PM
GROMACS - 2019.5
3108
GROMACS
Bug
Closed
High
mdrun continuation no longer appends
09/27/2019 02:45 PM
GROMACS - 2020-beta2
3106
GROMACS
Task
Closed
Normal
Implement multiple pulses with GPU communication
Alan Gray
02/16/2020 09:15 PM
GROMACS - future
3064
GROMACS
Task
New
Normal
add test for perturbed bonded forces
12/27/2019 04:22 PM
GROMACS - 2021
3063
GROMACS
Bug
Closed
Normal
Long-distance bonded interaction issue with CUDA and domain decomposition
Berk Hess
09/04/2019 02:05 PM
GROMACS - 2019.4
2992
GROMACS
Task
New
Normal
Split hw_opt in const user options and dynamic settings
12/27/2019 04:31 PM
GROMACS - future
2979
GROMACS
Task
Closed
Normal
Reconsider default 1 OpenMP thread per thread-MPI rank
Berk Hess
12/20/2019 08:24 AM
GROMACS - 2020-rc1
2977
GROMACS
Feature
New
Normal
print DD load balancing improvement
06/13/2019 10:56 AM
2952
GROMACS
Bug
Closed
Normal
Reference SIMD fails with float SIMD width 16
Berk Hess
06/05/2019 10:07 AM
GROMACS - 2019.3
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