- Registered on: 10/06/2017
- Last connection: 11/13/2019
- 04:05 PM GROMACS Bug #3203 (Fix uploaded): Segmentation fault using gmx solvent
- sorry for the confusion, I meant that I'll add those checks :)
Check uploaded here: https://gerrit.gromacs.org/c/gro...
- 02:59 PM GROMACS Bug #3203: Segmentation fault using gmx solvent
- Thanks @Mark for debugging some more.
I can see that the code for reading in structure files checks for NAN in coord...
- 11:11 AM GROMACS Bug #3203 (Accepted): Segmentation fault using gmx solvent
- reproduced on 2019 HEAD
- 09:36 AM GROMACS Bug #3184 (Rejected): Cmdlineparser can't work with single-quoted atom names (typically used in DNA)
- ok, thanks for investigating!
- 09:32 AM GROMACS Bug #3200 (Blocked, need info): Segmentation Fault in gmx mdrun in gromacs 2020-beta1
- also not reproduced with the CUDA build
- 09:31 AM GROMACS Bug #3203: Segmentation fault using gmx solvent
Please also upload the system.top file.
- 08:19 AM GROMACS Bug #3203: Segmentation fault using gmx solvent
thanks for the report, I'll have a look into it.
Can you please also add the exact commands you used that ...
- 09:24 AM GROMACS Revision 1015b798: Fix formatting error
- Change-Id: I60d50edfc050eb4b7015d4bf6dab3c8c279473e3
- 11:22 PM GROMACS Revision 50215c95: Add build to run clang-format update on Jenkins
- Change-Id: Ie0a9cf442b172e9e96d786d01dd381e557e43e73
- 03:02 PM GROMACS Bug #3200: Segmentation Fault in gmx mdrun in gromacs 2020-beta1
- still waiting on the CUDA build on my other machine, then we will know
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