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Paul Bauer

  • Registered on: 10/06/2017
  • Last connection: 11/13/2019

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11/15/2019

04:05 PM GROMACS Bug #3203 (Fix uploaded): Segmentation fault using gmx solvent
sorry for the confusion, I meant that I'll add those checks :)
Check uploaded here: https://gerrit.gromacs.org/c/gro...
02:59 PM GROMACS Bug #3203: Segmentation fault using gmx solvent
Thanks @Mark for debugging some more.
I can see that the code for reading in structure files checks for NAN in coord...
11:11 AM GROMACS Bug #3203 (Accepted): Segmentation fault using gmx solvent
reproduced on 2019 HEAD
09:36 AM GROMACS Bug #3184 (Rejected): Cmdlineparser can't work with single-quoted atom names (typically used in DNA)
ok, thanks for investigating!
09:32 AM GROMACS Bug #3200 (Blocked, need info): Segmentation Fault in gmx mdrun in gromacs 2020-beta1
also not reproduced with the CUDA build
09:31 AM GROMACS Bug #3203: Segmentation fault using gmx solvent
Thanks!
Please also upload the system.top file.
08:19 AM GROMACS Bug #3203: Segmentation fault using gmx solvent
Hello,
thanks for the report, I'll have a look into it.
Can you please also add the exact commands you used that ...

11/14/2019

09:24 AM GROMACS Revision 1015b798: Fix formatting error
Change-Id: I60d50edfc050eb4b7015d4bf6dab3c8c279473e3

11/13/2019

11:22 PM GROMACS Revision 50215c95: Add build to run clang-format update on Jenkins
Change-Id: Ie0a9cf442b172e9e96d786d01dd381e557e43e73
03:02 PM GROMACS Bug #3200: Segmentation Fault in gmx mdrun in gromacs 2020-beta1
still waiting on the CUDA build on my other machine, then we will know

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