2018.1

Bug #2377: Useless spam of "No option -multi"

Bug #2378: GPU profiler state not reset on PME ranks

Bug #2381: COMM removal requested for part of the system works on the whole system

Bug #2385: PME mixed mode produces incorrect results with box scaling

Bug #2386: assertion failure in grompp

Bug #2388: inconsistent pinning behavior due to missing SMT info on AMD Zen

Bug #2392: mdp field 'define' does not correctly handle inputs that used to work

Bug #2394: energy average printing segfaults when no data sets are recorded

Bug #2398: Assertion failure with test particle insertion

Bug #2399: group scheme always uses generic non-bonded kernel

Bug #2400: Namespace for isfinite in src/external/lmfit/lmmin.cpp is not specified

Bug #2401: Python scripts use hardcoded #!/usr/bin/python instead of #!/usr/bin/env python

Bug #2403: Multidir sim with #mpiranks = 2*#sim fails

Bug #2405: improve gpu_utils-test

Bug #2407: Incorrect grompp net charge warning

Bug #2409: PME gather CUDA kernel failing on Fermi

Bug #2414: -multidir not working due to erroneous use of MPI_Comm_create

Bug #2418: Incorrect results with Nose-Hoover temperature coupling

Bug #2424: LJ force and energy incorrect with cutoff-scheme=group and gcc 6

Bug #2431: mdrun -multidir fails with single directory

Bug #2432: mdrun multidir fails with separate PME ranks

Bug #2433: Error in MPI_Allreduce when applying AWH biasing and for multiple sharing biases

Bug #2434: wrong values accumulated to dvdlambda in SHAKE with FE calcs

Bug #2436: Attempt to read file pointer fplog = nullptr with AWH

Bug #2439: AWH deconvolution not working for sharing simulations

Bug #2440: Multidir simulations can stop at different times when using mdrun -maxh

Bug #2441: Value of AWH coordinate not set for certain numbers of MPI ranks

Bug #2443: clang 6.0 with CUDA support restrictions

Bug #2444: Eneergy minimization crashes due to vsites

Bug #2446: Spike in COM pulling force at checkpoint continuation with geometry=direction-periodic

Bug #2447: "gmx mdrun -maxh" not working with AWH

Bug #2455: Incorrect virial with AWH and domain decomposition

Bug #2457: mdrun maxh not working (except for -multidir?)

Feature #2130: n2t files are undocumented

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